Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.64□□□□□ -0.55
APOBP04114 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
APOBP04114 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOBP04114 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOBP04114 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOBP04114 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOBP04114 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOBP04114 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOBP04114 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.64□□□□□ -0.55
APOBP04114 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOBP04114 RPS2P1-201ENST00000434010 821 ntBASIC11.64□□□□□ -0.55
APOBP04114 AC004967.1-201ENST00000453589 447 ntBASIC11.64□□□□□ -0.55
APOBP04114 ALG1L5P-201ENST00000482043 771 ntBASIC11.64□□□□□ -0.55
APOBP04114 AL353692.3-201ENST00000407031 1396 ntBASIC11.64□□□□□ -0.55
APOBP04114 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
APOBP04114 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
APOBP04114 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.64□□□□□ -0.55
APOBP04114 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.64□□□□□ -0.55
APOBP04114 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.64□□□□□ -0.55
APOBP04114 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.64□□□□□ -0.55
APOBP04114 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC11.63□□□□□ -0.55
APOBP04114 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.63□□□□□ -0.55
APOBP04114 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.63□□□□□ -0.55
APOBP04114 AL138831.2-201ENST00000606564 490 ntBASIC11.63□□□□□ -0.55
APOBP04114 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.63□□□□□ -0.55
APOBP04114 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
APOBP04114 GOLGA2P11-201ENST00000562660 1621 ntBASIC11.63□□□□□ -0.55
APOBP04114 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
APOBP04114 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC11.63□□□□□ -0.55
APOBP04114 AC092667.1-201ENST00000434301 2586 ntBASIC11.63□□□□□ -0.55
APOBP04114 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.63□□□□□ -0.55
APOBP04114 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.63□□□□□ -0.55
APOBP04114 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.63□□□□□ -0.55
APOBP04114 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.63□□□□□ -0.55
APOBP04114 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.63□□□□□ -0.55
APOBP04114 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.63□□□□□ -0.55
APOBP04114 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
APOBP04114 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOBP04114 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.63□□□□□ -0.55
APOBP04114 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.63□□□□□ -0.55
APOBP04114 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.63□□□□□ -0.55
APOBP04114 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
APOBP04114 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC11.62□□□□□ -0.55
APOBP04114 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.62□□□□□ -0.55
APOBP04114 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC11.62□□□□□ -0.55
APOBP04114 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC11.62□□□□□ -0.55
APOBP04114 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC11.62□□□□□ -0.55
APOBP04114 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 LINC01521-201ENST00000504184 1943 ntBASIC11.62□□□□□ -0.55
APOBP04114 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.62□□□□□ -0.55
APOBP04114 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
APOBP04114 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.62□□□□□ -0.55
APOBP04114 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.62□□□□□ -0.55
APOBP04114 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.62□□□□□ -0.55
APOBP04114 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
APOBP04114 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.62□□□□□ -0.55
APOBP04114 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
APOBP04114 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOBP04114 CNN2P11-201ENST00000429351 262 ntBASIC11.62□□□□□ -0.55
APOBP04114 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.62□□□□□ -0.55
APOBP04114 LINC01711-201ENST00000598340 967 ntBASIC11.62□□□□□ -0.55
APOBP04114 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.62□□□□□ -0.55
APOBP04114 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC11.62□□□□□ -0.55
APOBP04114 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
APOBP04114 AP003733.1-201ENST00000491725 852 ntBASIC11.62□□□□□ -0.55
APOBP04114 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.62□□□□□ -0.55
APOBP04114 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.62□□□□□ -0.55
APOBP04114 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
APOBP04114 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms