Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRNA1P02708 IGHGP-201ENST00000390555 1178 ntBASIC20.32■□□□□ 0.84
CHRNA1P02708 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.32■□□□□ 0.84
CHRNA1P02708 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.32■□□□□ 0.84
CHRNA1P02708 GPR32P1-201ENST00000601788 811 ntBASIC20.32■□□□□ 0.84
CHRNA1P02708 IGHV3-41-201ENST00000613121 348 ntBASIC20.32■□□□□ 0.84
CHRNA1P02708 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.32■□□□□ 0.84
CHRNA1P02708 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
CHRNA1P02708 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRNA1P02708 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.32■□□□□ 0.84
CHRNA1P02708 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNA1P02708 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHRNA1P02708 AL032819.2-201ENST00000624543 2162 ntBASIC20.31■□□□□ 0.84
CHRNA1P02708 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNA1P02708 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHRNA1P02708 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNA1P02708 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNA1P02708 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNA1P02708 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNA1P02708 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.31■□□□□ 0.84
CHRNA1P02708 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.31■□□□□ 0.84
CHRNA1P02708 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNA1P02708 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNA1P02708 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNA1P02708 Z98044.1-201ENST00000632503 1764 ntBASIC20.31■□□□□ 0.84
CHRNA1P02708 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNA1P02708 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRNA1P02708 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHRNA1P02708 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHRNA1P02708 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRNA1P02708 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHRNA1P02708 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
CHRNA1P02708 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 AL357033.4-201ENST00000617703 1807 ntBASIC20.3■□□□□ 0.84
CHRNA1P02708 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 KRT8P10-201ENST00000450021 1447 ntBASIC20.3■□□□□ 0.84
CHRNA1P02708 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRNA1P02708 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRNA1P02708 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHRNA1P02708 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 AC091304.2-201ENST00000564639 760 ntBASIC20.3■□□□□ 0.84
CHRNA1P02708 AC024563.2-201ENST00000603282 481 ntBASIC20.3■□□□□ 0.84
CHRNA1P02708 AL121772.3-201ENST00000610840 674 ntBASIC20.3■□□□□ 0.84
CHRNA1P02708 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRNA1P02708 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNA1P02708 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRNA1P02708 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRNA1P02708 AFG3L1P-217ENST00000557444 2447 ntBASIC20.29■□□□□ 0.84
CHRNA1P02708 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNA1P02708 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNA1P02708 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNA1P02708 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNA1P02708 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CHRNA1P02708 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.29■□□□□ 0.84
CHRNA1P02708 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.29■□□□□ 0.84
CHRNA1P02708 KRT18P31-201ENST00000506277 1292 ntBASIC20.29■□□□□ 0.84
CHRNA1P02708 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.29■□□□□ 0.84
CHRNA1P02708 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.29■□□□□ 0.84
CHRNA1P02708 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CHRNA1P02708 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.29■□□□□ 0.84
CHRNA1P02708 AC233702.3-201ENST00000578656 1387 ntBASIC20.29■□□□□ 0.84
CHRNA1P02708 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.29■□□□□ 0.84
CHRNA1P02708 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNA1P02708 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.29■□□□□ 0.84
CHRNA1P02708 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNA1P02708 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.29■□□□□ 0.84
CHRNA1P02708 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNA1P02708 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNA1P02708 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.28■□□□□ 0.84
CHRNA1P02708 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNA1P02708 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNA1P02708 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNA1P02708 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CHRNA1P02708 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNA1P02708 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CHRNA1P02708 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.28■□□□□ 0.84
CHRNA1P02708 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.28■□□□□ 0.84
CHRNA1P02708 AC104692.2-201ENST00000603054 253 ntBASIC20.28■□□□□ 0.84
CHRNA1P02708 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms