Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT6AP02538 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT6AP02538 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT6AP02538 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT6AP02538 CKBP1-201ENST00000565489 1086 ntBASIC18.12■□□□□ 0.49
KRT6AP02538 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 AC130371.2-201ENST00000619443 611 ntBASIC18.12■□□□□ 0.49
KRT6AP02538 AL359736.2-201ENST00000621992 437 ntBASIC18.12■□□□□ 0.49
KRT6AP02538 MYC-208ENST00000641036 567 ntBASIC18.12■□□□□ 0.49
KRT6AP02538 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT6AP02538 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 AL135905.2-201ENST00000584934 1404 ntBASIC18.12■□□□□ 0.49
KRT6AP02538 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 MTMR9LP-203ENST00000426597 1545 ntBASIC18.12■□□□□ 0.49
KRT6AP02538 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT6AP02538 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT6AP02538 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
KRT6AP02538 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KRT6AP02538 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT6AP02538 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT6AP02538 KRT18P29-201ENST00000397031 1267 ntBASIC18.11■□□□□ 0.49
KRT6AP02538 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT6AP02538 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT6AP02538 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.11■□□□□ 0.49
KRT6AP02538 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.11■□□□□ 0.49
KRT6AP02538 ITM2C-210ENST00000620962 501 ntBASIC18.11■□□□□ 0.49
KRT6AP02538 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT6AP02538 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
KRT6AP02538 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
KRT6AP02538 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT6AP02538 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT6AP02538 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT6AP02538 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT6AP02538 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT6AP02538 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KRT6AP02538 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT6AP02538 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT6AP02538 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT6AP02538 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT6AP02538 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT6AP02538 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT6AP02538 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT6AP02538 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KRT6AP02538 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT6AP02538 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
KRT6AP02538 MIR6786-201ENST00000616843 113 ntBASIC18.1■□□□□ 0.49
KRT6AP02538 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
KRT6AP02538 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT6AP02538 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
KRT6AP02538 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT6AP02538 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT6AP02538 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KRT6AP02538 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT6AP02538 FSCN1P1-201ENST00000568912 1481 ntBASIC18.09■□□□□ 0.49
KRT6AP02538 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT6AP02538 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT6AP02538 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT6AP02538 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
KRT6AP02538 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT6AP02538 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KRT6AP02538 B3GAT3P1-201ENST00000471720 806 ntBASIC18.09■□□□□ 0.49
KRT6AP02538 AC011506.1-201ENST00000474329 610 ntBASIC18.09■□□□□ 0.49
KRT6AP02538 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT6AP02538 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
KRT6AP02538 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT6AP02538 AC126763.1-201ENST00000552015 2118 ntBASIC18.09■□□□□ 0.49
KRT6AP02538 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms