Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 AP002982.1-201ENST00000492365 877 ntBASIC16.8■□□□□ 0.28
HLA-DQA2P01906 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 AC073648.6-201ENST00000641589 218 ntBASIC16.8■□□□□ 0.28
HLA-DQA2P01906 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DQA2P01906 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 RN7SL471P-201ENST00000580476 299 ntBASIC16.79■□□□□ 0.28
HLA-DQA2P01906 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.79■□□□□ 0.28
HLA-DQA2P01906 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA2P01906 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 C1QBPP2-201ENST00000528754 825 ntBASIC16.78■□□□□ 0.28
HLA-DQA2P01906 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA2P01906 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms