Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFBP01127 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFBP01127 AL512408.1-201ENST00000569378 2000 ntBASIC18.75■□□□□ 0.59
PDGFBP01127 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFBP01127 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFBP01127 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFBP01127 DNAJB3-201ENST00000446806 729 ntBASIC18.75■□□□□ 0.59
PDGFBP01127 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.75■□□□□ 0.59
PDGFBP01127 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.75■□□□□ 0.59
PDGFBP01127 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.75■□□□□ 0.59
PDGFBP01127 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.75■□□□□ 0.59
PDGFBP01127 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.75■□□□□ 0.59
PDGFBP01127 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFBP01127 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFBP01127 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFBP01127 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFBP01127 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDGFBP01127 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDGFBP01127 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFBP01127 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFBP01127 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFBP01127 RBM17P3-201ENST00000417687 1192 ntBASIC18.74■□□□□ 0.59
PDGFBP01127 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PDGFBP01127 RNA5SP415-201ENST00000517246 115 ntBASIC18.74■□□□□ 0.59
PDGFBP01127 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.74■□□□□ 0.59
PDGFBP01127 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.74■□□□□ 0.59
PDGFBP01127 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFBP01127 Z83851.2-201ENST00000609564 659 ntBASIC18.74■□□□□ 0.59
PDGFBP01127 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFBP01127 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFBP01127 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFBP01127 KRT18P28-201ENST00000453838 1332 ntBASIC18.74■□□□□ 0.59
PDGFBP01127 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFBP01127 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDGFBP01127 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.73■□□□□ 0.59
PDGFBP01127 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDGFBP01127 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDGFBP01127 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDGFBP01127 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDGFBP01127 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFBP01127 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.73■□□□□ 0.59
PDGFBP01127 AC040169.1-201ENST00000565382 521 ntBASIC18.73■□□□□ 0.59
PDGFBP01127 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.73■□□□□ 0.59
PDGFBP01127 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDGFBP01127 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFBP01127 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDGFBP01127 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDGFBP01127 AC006333.2-201ENST00000607957 2099 ntBASIC18.73■□□□□ 0.59
PDGFBP01127 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDGFBP01127 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFBP01127 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.73■□□□□ 0.59
PDGFBP01127 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.73■□□□□ 0.59
PDGFBP01127 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFBP01127 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFBP01127 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDGFBP01127 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFBP01127 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.72■□□□□ 0.59
PDGFBP01127 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFBP01127 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFBP01127 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFBP01127 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.72■□□□□ 0.59
PDGFBP01127 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFBP01127 METTL21AP1-201ENST00000438852 635 ntBASIC18.72■□□□□ 0.59
PDGFBP01127 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.72■□□□□ 0.59
PDGFBP01127 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.72■□□□□ 0.59
PDGFBP01127 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFBP01127 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDGFBP01127 PKD1P6-201ENST00000343738 4769 ntBASIC18.72■□□□□ 0.59
PDGFBP01127 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDGFBP01127 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFBP01127 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
PDGFBP01127 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PDGFBP01127 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFBP01127 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.71■□□□□ 0.59
PDGFBP01127 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDGFBP01127 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.71■□□□□ 0.59
PDGFBP01127 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.71■□□□□ 0.59
PDGFBP01127 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.71■□□□□ 0.59
PDGFBP01127 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFBP01127 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.71■□□□□ 0.59
PDGFBP01127 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms