Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.18■□□□□ 0.82
TIMP1P01033 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TIMP1P01033 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.18■□□□□ 0.82
TIMP1P01033 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.18■□□□□ 0.82
TIMP1P01033 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TIMP1P01033 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TIMP1P01033 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TIMP1P01033 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.17■□□□□ 0.82
TIMP1P01033 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.17■□□□□ 0.82
TIMP1P01033 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TIMP1P01033 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.17■□□□□ 0.82
TIMP1P01033 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.17■□□□□ 0.82
TIMP1P01033 AC055717.3-201ENST00000622967 595 ntBASIC20.17■□□□□ 0.82
TIMP1P01033 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TIMP1P01033 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TIMP1P01033 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TIMP1P01033 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TIMP1P01033 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TIMP1P01033 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TIMP1P01033 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.16■□□□□ 0.82
TIMP1P01033 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
TIMP1P01033 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.16■□□□□ 0.82
TIMP1P01033 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TIMP1P01033 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TIMP1P01033 RCN1P2-201ENST00000398357 915 ntBASIC20.16■□□□□ 0.82
TIMP1P01033 RBM17P3-201ENST00000417687 1192 ntBASIC20.16■□□□□ 0.82
TIMP1P01033 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.16■□□□□ 0.82
TIMP1P01033 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.16■□□□□ 0.82
TIMP1P01033 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.16■□□□□ 0.82
TIMP1P01033 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.16■□□□□ 0.82
TIMP1P01033 MTDHP3-201ENST00000594186 672 ntBASIC20.16■□□□□ 0.82
TIMP1P01033 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.16■□□□□ 0.82
TIMP1P01033 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.16■□□□□ 0.82
TIMP1P01033 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TIMP1P01033 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TIMP1P01033 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TIMP1P01033 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TIMP1P01033 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TIMP1P01033 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.15■□□□□ 0.82
TIMP1P01033 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.15■□□□□ 0.82
TIMP1P01033 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.15■□□□□ 0.82
TIMP1P01033 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.15■□□□□ 0.82
TIMP1P01033 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.15■□□□□ 0.82
TIMP1P01033 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TIMP1P01033 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TIMP1P01033 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TIMP1P01033 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TIMP1P01033 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.14■□□□□ 0.81
TIMP1P01033 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.14■□□□□ 0.81
TIMP1P01033 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 FEM1AP3-201ENST00000403722 1741 ntBASIC20.14■□□□□ 0.81
TIMP1P01033 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.14■□□□□ 0.81
TIMP1P01033 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.14■□□□□ 0.81
TIMP1P01033 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
TIMP1P01033 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.14■□□□□ 0.81
TIMP1P01033 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.14■□□□□ 0.81
TIMP1P01033 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.14■□□□□ 0.81
TIMP1P01033 HMGN1P19-201ENST00000436976 333 ntBASIC20.14■□□□□ 0.81
TIMP1P01033 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.14■□□□□ 0.81
TIMP1P01033 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.14■□□□□ 0.81
TIMP1P01033 AC145285.3-201ENST00000564603 959 ntBASIC20.14■□□□□ 0.81
TIMP1P01033 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TIMP1P01033 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TIMP1P01033 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TIMP1P01033 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms