Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT4O95628 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT4O95628 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT4O95628 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.6■□□□□ 0.25
CNOT4O95628 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT4O95628 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT4O95628 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.6■□□□□ 0.25
CNOT4O95628 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT4O95628 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT4O95628 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 AL109659.2-201ENST00000606809 1674 ntBASIC16.59■□□□□ 0.25
CNOT4O95628 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CNOT4O95628 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CNOT4O95628 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.59■□□□□ 0.25
CNOT4O95628 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.59■□□□□ 0.25
CNOT4O95628 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.59■□□□□ 0.25
CNOT4O95628 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CNOT4O95628 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.59■□□□□ 0.25
CNOT4O95628 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.59■□□□□ 0.25
CNOT4O95628 MCCD1P1-208ENST00000445732 328 ntBASIC16.59■□□□□ 0.25
CNOT4O95628 COX11P1-201ENST00000489116 835 ntBASIC16.59■□□□□ 0.25
CNOT4O95628 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CNOT4O95628 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
CNOT4O95628 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CNOT4O95628 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.59■□□□□ 0.25
CNOT4O95628 AC008622.2-201ENST00000617006 1229 ntBASIC16.59■□□□□ 0.25
CNOT4O95628 AC006011.2-201ENST00000621313 1158 ntBASIC16.59■□□□□ 0.25
CNOT4O95628 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CNOT4O95628 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CNOT4O95628 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CNOT4O95628 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CNOT4O95628 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNOT4O95628 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNOT4O95628 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CNOT4O95628 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CNOT4O95628 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.58■□□□□ 0.24
CNOT4O95628 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.58■□□□□ 0.24
CNOT4O95628 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 AL023284.2-201ENST00000405850 579 ntBASIC16.58■□□□□ 0.24
CNOT4O95628 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 LINC01238-205ENST00000567549 1107 ntBASIC16.58■□□□□ 0.24
CNOT4O95628 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CNOT4O95628 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.58■□□□□ 0.24
CNOT4O95628 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.58■□□□□ 0.24
CNOT4O95628 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.58■□□□□ 0.24
CNOT4O95628 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CNOT4O95628 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CNOT4O95628 AC018445.3-201ENST00000624177 1945 ntBASIC16.58■□□□□ 0.24
CNOT4O95628 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 AL512353.2-201ENST00000448759 1962 ntBASIC16.58■□□□□ 0.24
CNOT4O95628 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.58■□□□□ 0.24
CNOT4O95628 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.58■□□□□ 0.24
CNOT4O95628 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CNOT4O95628 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNOT4O95628 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.57■□□□□ 0.24
CNOT4O95628 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.57■□□□□ 0.24
CNOT4O95628 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 KRT8P45-201ENST00000414328 1447 ntBASIC16.57■□□□□ 0.24
CNOT4O95628 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.57■□□□□ 0.24
CNOT4O95628 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.57■□□□□ 0.24
CNOT4O95628 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.57■□□□□ 0.24
CNOT4O95628 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.57■□□□□ 0.24
CNOT4O95628 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.57■□□□□ 0.24
CNOT4O95628 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms