Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.67■□□□□ 0.26
CDRT1O95170 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.67■□□□□ 0.26
CDRT1O95170 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
CDRT1O95170 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.67■□□□□ 0.26
CDRT1O95170 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.67■□□□□ 0.26
CDRT1O95170 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CDRT1O95170 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.66■□□□□ 0.26
CDRT1O95170 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDRT1O95170 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDRT1O95170 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDRT1O95170 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.66■□□□□ 0.26
CDRT1O95170 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.66■□□□□ 0.26
CDRT1O95170 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.66■□□□□ 0.26
CDRT1O95170 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.66■□□□□ 0.26
CDRT1O95170 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.66■□□□□ 0.26
CDRT1O95170 AC105036.2-201ENST00000569468 176 ntBASIC16.66■□□□□ 0.26
CDRT1O95170 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.66■□□□□ 0.26
CDRT1O95170 AC080038.1-201ENST00000611274 1154 ntBASIC16.66■□□□□ 0.26
CDRT1O95170 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.66■□□□□ 0.26
CDRT1O95170 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDRT1O95170 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.66■□□□□ 0.26
CDRT1O95170 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDRT1O95170 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDRT1O95170 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.65■□□□□ 0.26
CDRT1O95170 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDRT1O95170 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.65■□□□□ 0.26
CDRT1O95170 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.65■□□□□ 0.26
CDRT1O95170 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.65■□□□□ 0.26
CDRT1O95170 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.65■□□□□ 0.26
CDRT1O95170 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.65■□□□□ 0.26
CDRT1O95170 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 AF201337.1-201ENST00000520239 748 ntBASIC16.65■□□□□ 0.26
CDRT1O95170 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDRT1O95170 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.65■□□□□ 0.26
CDRT1O95170 AL050303.2-201ENST00000619798 666 ntBASIC16.65■□□□□ 0.26
CDRT1O95170 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 AC073111.5-205ENST00000641717 521 ntBASIC16.65■□□□□ 0.26
CDRT1O95170 AC135776.1-201ENST00000319817 2481 ntBASIC16.65■□□□□ 0.26
CDRT1O95170 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDRT1O95170 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDRT1O95170 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDRT1O95170 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDRT1O95170 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDRT1O95170 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDRT1O95170 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDRT1O95170 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CDRT1O95170 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDRT1O95170 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CDRT1O95170 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.64■□□□□ 0.26
CDRT1O95170 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms