Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BEST1O76090 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.61■□□□□ 0.73
BEST1O76090 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.61■□□□□ 0.73
BEST1O76090 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.61■□□□□ 0.73
BEST1O76090 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 AL031133.1-201ENST00000406807 723 ntBASIC19.61■□□□□ 0.73
BEST1O76090 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BEST1O76090 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 AC104390.1-201ENST00000555663 520 ntBASIC19.61■□□□□ 0.73
BEST1O76090 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
BEST1O76090 HYMAI.1-201ENST00000620949 238 ntBASIC19.61■□□□□ 0.73
BEST1O76090 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 AC099343.3-201ENST00000605834 2503 ntBASIC19.61■□□□□ 0.73
BEST1O76090 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST1O76090 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.61■□□□□ 0.73
BEST1O76090 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.6■□□□□ 0.73
BEST1O76090 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.6■□□□□ 0.73
BEST1O76090 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 AC112907.2-201ENST00000448639 330 ntBASIC19.6■□□□□ 0.73
BEST1O76090 RASA4DP-201ENST00000460726 1199 ntBASIC19.6■□□□□ 0.73
BEST1O76090 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.6■□□□□ 0.73
BEST1O76090 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.6■□□□□ 0.73
BEST1O76090 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.6■□□□□ 0.73
BEST1O76090 AL157888.1-201ENST00000631930 593 ntBASIC19.6■□□□□ 0.73
BEST1O76090 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BEST1O76090 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST1O76090 KRT8P7-201ENST00000533003 1432 ntBASIC19.59■□□□□ 0.73
BEST1O76090 KRT8P50-201ENST00000562022 1438 ntBASIC19.59■□□□□ 0.73
BEST1O76090 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
BEST1O76090 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
BEST1O76090 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 AC092597.1-201ENST00000487352 616 ntBASIC19.59■□□□□ 0.73
BEST1O76090 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.59■□□□□ 0.73
BEST1O76090 AC087388.1-201ENST00000571370 1112 ntBASIC19.59■□□□□ 0.73
BEST1O76090 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.59■□□□□ 0.73
BEST1O76090 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.59■□□□□ 0.73
BEST1O76090 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST1O76090 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.59■□□□□ 0.73
BEST1O76090 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.59■□□□□ 0.73
BEST1O76090 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST1O76090 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BEST1O76090 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST1O76090 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.58■□□□□ 0.73
BEST1O76090 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST1O76090 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST1O76090 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST1O76090 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
BEST1O76090 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BEST1O76090 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST1O76090 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.58■□□□□ 0.73
BEST1O76090 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST1O76090 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.58■□□□□ 0.72
BEST1O76090 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 LINC01238-205ENST00000567549 1107 ntBASIC19.58■□□□□ 0.72
BEST1O76090 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.58■□□□□ 0.72
BEST1O76090 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms