Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT3O75175 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT3O75175 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CNOT3O75175 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.12■□□□□ 0.49
CNOT3O75175 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNOT3O75175 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.11■□□□□ 0.49
CNOT3O75175 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT3O75175 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT3O75175 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CNOT3O75175 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.11■□□□□ 0.49
CNOT3O75175 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT3O75175 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.11■□□□□ 0.49
CNOT3O75175 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.11■□□□□ 0.49
CNOT3O75175 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNOT3O75175 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT3O75175 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT3O75175 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CNOT3O75175 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT3O75175 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT3O75175 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT3O75175 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT3O75175 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.1■□□□□ 0.49
CNOT3O75175 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CNOT3O75175 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.1■□□□□ 0.49
CNOT3O75175 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.1■□□□□ 0.49
CNOT3O75175 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CNOT3O75175 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT3O75175 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT3O75175 AC104076.2-201ENST00000448912 469 ntBASIC18.1■□□□□ 0.49
CNOT3O75175 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT3O75175 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CNOT3O75175 AL445228.2-201ENST00000605589 952 ntBASIC18.1■□□□□ 0.49
CNOT3O75175 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 AP000997.3-201ENST00000623333 2250 ntBASIC18.1■□□□□ 0.49
CNOT3O75175 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CNOT3O75175 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.1■□□□□ 0.49
CNOT3O75175 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT3O75175 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT3O75175 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CNOT3O75175 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.09■□□□□ 0.49
CNOT3O75175 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CNOT3O75175 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT3O75175 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.09■□□□□ 0.49
CNOT3O75175 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CNOT3O75175 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT3O75175 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.09■□□□□ 0.49
CNOT3O75175 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
CNOT3O75175 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT3O75175 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT3O75175 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.09■□□□□ 0.49
CNOT3O75175 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.09■□□□□ 0.49
CNOT3O75175 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT3O75175 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT3O75175 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.09■□□□□ 0.49
CNOT3O75175 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNOT3O75175 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CNOT3O75175 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNOT3O75175 PCDHB18P-201ENST00000524813 2368 ntBASIC18.08■□□□□ 0.48
CNOT3O75175 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT3O75175 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT3O75175 KRT18P35-201ENST00000510488 1269 ntBASIC18.08■□□□□ 0.48
CNOT3O75175 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.08■□□□□ 0.48
CNOT3O75175 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT3O75175 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CNOT3O75175 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT3O75175 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CNOT3O75175 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT3O75175 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT3O75175 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CNOT3O75175 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT3O75175 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT3O75175 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms