Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.63■□□□□ 0.41
URB1O60287 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
URB1O60287 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.63■□□□□ 0.41
URB1O60287 MIR940-201ENST00000401276 94 ntBASIC17.63■□□□□ 0.41
URB1O60287 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.63■□□□□ 0.41
URB1O60287 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.62■□□□□ 0.41
URB1O60287 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
URB1O60287 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.62■□□□□ 0.41
URB1O60287 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.62■□□□□ 0.41
URB1O60287 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
URB1O60287 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
URB1O60287 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
URB1O60287 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
URB1O60287 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.61■□□□□ 0.41
URB1O60287 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.61■□□□□ 0.41
URB1O60287 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.61■□□□□ 0.41
URB1O60287 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.61■□□□□ 0.41
URB1O60287 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
URB1O60287 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
URB1O60287 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.61■□□□□ 0.41
URB1O60287 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.61■□□□□ 0.41
URB1O60287 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.61■□□□□ 0.41
URB1O60287 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
URB1O60287 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
URB1O60287 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.61■□□□□ 0.41
URB1O60287 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
URB1O60287 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.61■□□□□ 0.41
URB1O60287 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
URB1O60287 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.61■□□□□ 0.41
URB1O60287 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.61■□□□□ 0.41
URB1O60287 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 MIR564-202ENST00000385049 94 ntBASIC17.61■□□□□ 0.41
URB1O60287 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.61■□□□□ 0.41
URB1O60287 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.61■□□□□ 0.41
URB1O60287 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.61■□□□□ 0.41
URB1O60287 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.61■□□□□ 0.41
URB1O60287 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
URB1O60287 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.61■□□□□ 0.41
URB1O60287 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
URB1O60287 AC092720.2-201ENST00000602388 1665 ntBASIC17.61■□□□□ 0.41
URB1O60287 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
URB1O60287 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.6■□□□□ 0.41
URB1O60287 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.6■□□□□ 0.41
URB1O60287 AP001160.2-201ENST00000596071 487 ntBASIC17.6■□□□□ 0.41
URB1O60287 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
URB1O60287 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
URB1O60287 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
URB1O60287 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
URB1O60287 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.6■□□□□ 0.41
URB1O60287 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.6■□□□□ 0.41
URB1O60287 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.6■□□□□ 0.41
URB1O60287 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
URB1O60287 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.6■□□□□ 0.41
URB1O60287 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
URB1O60287 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.6■□□□□ 0.41
URB1O60287 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
URB1O60287 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
URB1O60287 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
URB1O60287 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
URB1O60287 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms