Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXTL3O43909 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.26■□□□□ 0.83
EXTL3O43909 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.25■□□□□ 0.83
EXTL3O43909 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 AC004408.2-201ENST00000623613 2777 ntBASIC20.25■□□□□ 0.83
EXTL3O43909 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
EXTL3O43909 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
EXTL3O43909 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.25■□□□□ 0.83
EXTL3O43909 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.25■□□□□ 0.83
EXTL3O43909 AC112497.1-201ENST00000624824 639 ntBASIC20.25■□□□□ 0.83
EXTL3O43909 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 AC112777.1-201ENST00000540175 1423 ntBASIC20.25■□□□□ 0.83
EXTL3O43909 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
EXTL3O43909 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXTL3O43909 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
EXTL3O43909 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
EXTL3O43909 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
EXTL3O43909 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.24■□□□□ 0.83
EXTL3O43909 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.24■□□□□ 0.83
EXTL3O43909 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.24■□□□□ 0.83
EXTL3O43909 COX11P1-201ENST00000489116 835 ntBASIC20.24■□□□□ 0.83
EXTL3O43909 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.24■□□□□ 0.83
EXTL3O43909 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
EXTL3O43909 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
EXTL3O43909 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
EXTL3O43909 AL499627.1-201ENST00000569373 2188 ntBASIC20.24■□□□□ 0.83
EXTL3O43909 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXTL3O43909 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
EXTL3O43909 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EXTL3O43909 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EXTL3O43909 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.23■□□□□ 0.83
EXTL3O43909 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.23■□□□□ 0.83
EXTL3O43909 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.23■□□□□ 0.83
EXTL3O43909 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.23■□□□□ 0.83
EXTL3O43909 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.23■□□□□ 0.83
EXTL3O43909 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 MYC-208ENST00000641036 567 ntBASIC20.23■□□□□ 0.83
EXTL3O43909 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.23■□□□□ 0.83
EXTL3O43909 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.23■□□□□ 0.83
EXTL3O43909 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EXTL3O43909 AL138781.2-201ENST00000617896 1843 ntBASIC20.23■□□□□ 0.83
EXTL3O43909 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EXTL3O43909 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EXTL3O43909 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms