Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.53■□□□□ 0.24
SGCEO43556 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.53■□□□□ 0.24
SGCEO43556 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.53■□□□□ 0.24
SGCEO43556 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SGCEO43556 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.53■□□□□ 0.24
SGCEO43556 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.53■□□□□ 0.24
SGCEO43556 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.53■□□□□ 0.24
SGCEO43556 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SGCEO43556 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.53■□□□□ 0.24
SGCEO43556 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SGCEO43556 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.53■□□□□ 0.24
SGCEO43556 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SGCEO43556 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.52■□□□□ 0.24
SGCEO43556 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SGCEO43556 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SGCEO43556 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SGCEO43556 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SGCEO43556 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SGCEO43556 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.52■□□□□ 0.24
SGCEO43556 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.52■□□□□ 0.24
SGCEO43556 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.52■□□□□ 0.24
SGCEO43556 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.52■□□□□ 0.24
SGCEO43556 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
SGCEO43556 AC026471.5-201ENST00000615068 467 ntBASIC16.52■□□□□ 0.24
SGCEO43556 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGCEO43556 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.52■□□□□ 0.23
SGCEO43556 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGCEO43556 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SGCEO43556 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGCEO43556 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.52■□□□□ 0.23
SGCEO43556 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGCEO43556 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SGCEO43556 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.52■□□□□ 0.23
SGCEO43556 KRT8P3-201ENST00000519669 1449 ntBASIC16.52■□□□□ 0.23
SGCEO43556 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGCEO43556 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SGCEO43556 AC093525.10-201ENST00000625130 1569 ntBASIC16.51■□□□□ 0.23
SGCEO43556 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 Z98044.1-201ENST00000632503 1764 ntBASIC16.51■□□□□ 0.23
SGCEO43556 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.51■□□□□ 0.23
SGCEO43556 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.51■□□□□ 0.23
SGCEO43556 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
SGCEO43556 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.51■□□□□ 0.23
SGCEO43556 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SGCEO43556 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.51■□□□□ 0.23
SGCEO43556 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.51■□□□□ 0.23
SGCEO43556 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.51■□□□□ 0.23
SGCEO43556 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.51■□□□□ 0.23
SGCEO43556 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.51■□□□□ 0.23
SGCEO43556 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.51■□□□□ 0.23
SGCEO43556 SLC25A1P4-201ENST00000567977 778 ntBASIC16.51■□□□□ 0.23
SGCEO43556 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.51■□□□□ 0.23
SGCEO43556 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SGCEO43556 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGCEO43556 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.51■□□□□ 0.23
SGCEO43556 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.51■□□□□ 0.23
SGCEO43556 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SGCEO43556 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.5■□□□□ 0.23
SGCEO43556 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.5■□□□□ 0.23
SGCEO43556 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SGCEO43556 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 AL512353.2-201ENST00000448759 1962 ntBASIC16.5■□□□□ 0.23
SGCEO43556 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.5■□□□□ 0.23
SGCEO43556 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGCEO43556 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SGCEO43556 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms