Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD6O43541 AC104390.1-201ENST00000555663 520 ntBASIC18.88■□□□□ 0.61
SMAD6O43541 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD6O43541 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD6O43541 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD6O43541 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD6O43541 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD6O43541 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.87■□□□□ 0.61
SMAD6O43541 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 KRT8P7-201ENST00000533003 1432 ntBASIC18.87■□□□□ 0.61
SMAD6O43541 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.87■□□□□ 0.61
SMAD6O43541 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.87■□□□□ 0.61
SMAD6O43541 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.87■□□□□ 0.61
SMAD6O43541 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.87■□□□□ 0.61
SMAD6O43541 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SMAD6O43541 AC083849.1-201ENST00000615227 514 ntBASIC18.87■□□□□ 0.61
SMAD6O43541 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD6O43541 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD6O43541 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.86■□□□□ 0.61
SMAD6O43541 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD6O43541 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMAD6O43541 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMAD6O43541 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD6O43541 AC034232.1-201ENST00000506026 1064 ntBASIC18.86■□□□□ 0.61
SMAD6O43541 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD6O43541 MIR3917-201ENST00000580971 93 ntBASIC18.86■□□□□ 0.61
SMAD6O43541 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.86■□□□□ 0.61
SMAD6O43541 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.86■□□□□ 0.61
SMAD6O43541 AC010240.3-201ENST00000607688 395 ntBASIC18.86■□□□□ 0.61
SMAD6O43541 AL358472.4-201ENST00000633140 710 ntBASIC18.86■□□□□ 0.61
SMAD6O43541 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SMAD6O43541 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD6O43541 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD6O43541 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD6O43541 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD6O43541 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SMAD6O43541 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD6O43541 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMAD6O43541 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.85■□□□□ 0.61
SMAD6O43541 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.85■□□□□ 0.61
SMAD6O43541 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD6O43541 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD6O43541 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.85■□□□□ 0.61
SMAD6O43541 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD6O43541 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.85■□□□□ 0.61
SMAD6O43541 FAM86EP-206ENST00000510506 987 ntBASIC18.85■□□□□ 0.61
SMAD6O43541 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.85■□□□□ 0.61
SMAD6O43541 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.85■□□□□ 0.61
SMAD6O43541 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.85■□□□□ 0.61
SMAD6O43541 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.85■□□□□ 0.61
SMAD6O43541 AC079602.3-201ENST00000623931 403 ntBASIC18.85■□□□□ 0.61
SMAD6O43541 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD6O43541 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.85■□□□□ 0.61
SMAD6O43541 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD6O43541 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD6O43541 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMAD6O43541 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.84■□□□□ 0.61
SMAD6O43541 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMAD6O43541 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 KRT8P50-201ENST00000562022 1438 ntBASIC18.84■□□□□ 0.61
SMAD6O43541 LINC01311-201ENST00000565162 1445 ntBASIC18.84■□□□□ 0.61
SMAD6O43541 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMAD6O43541 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 HBZP1-201ENST00000354915 429 ntBASIC18.84■□□□□ 0.61
SMAD6O43541 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
SMAD6O43541 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 SPDYE13P-201ENST00000445314 798 ntBASIC18.84■□□□□ 0.61
SMAD6O43541 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.84■□□□□ 0.61
SMAD6O43541 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.84■□□□□ 0.61
SMAD6O43541 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.84■□□□□ 0.61
SMAD6O43541 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.84■□□□□ 0.61
SMAD6O43541 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
SMAD6O43541 AL121956.5-201ENST00000625261 221 ntBASIC18.84■□□□□ 0.61
SMAD6O43541 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMAD6O43541 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.84■□□□□ 0.61
SMAD6O43541 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms