Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
MSH5O43196 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.33■■□□□ 1.65
MSH5O43196 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
MSH5O43196 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC25.33■■□□□ 1.65
MSH5O43196 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MSH5O43196 AP000997.3-201ENST00000623333 2250 ntBASIC25.33■■□□□ 1.65
MSH5O43196 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MSH5O43196 FAM8A6P-201ENST00000407496 1135 ntBASIC25.33■■□□□ 1.65
MSH5O43196 MTND2P12-201ENST00000417560 1252 ntBASIC25.33■■□□□ 1.65
MSH5O43196 MTCYBP32-201ENST00000427945 1084 ntBASIC25.33■■□□□ 1.65
MSH5O43196 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.33■■□□□ 1.65
MSH5O43196 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
MSH5O43196 AC011506.1-201ENST00000474329 610 ntBASIC25.33■■□□□ 1.65
MSH5O43196 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.33■■□□□ 1.65
MSH5O43196 AC117500.1-201ENST00000497352 755 ntBASIC25.33■■□□□ 1.65
MSH5O43196 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC25.33■■□□□ 1.65
MSH5O43196 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC25.33■■□□□ 1.65
MSH5O43196 OR8K4P-201ENST00000534608 872 ntBASIC25.33■■□□□ 1.65
MSH5O43196 CD320-202ENST00000537716 1119 ntTSL 2 BASIC25.33■■□□□ 1.65
MSH5O43196 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC25.33■■□□□ 1.65
MSH5O43196 SLC25A1P4-201ENST00000567977 778 ntBASIC25.33■■□□□ 1.65
MSH5O43196 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.33■■□□□ 1.65
MSH5O43196 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.33■■□□□ 1.65
MSH5O43196 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.33■■□□□ 1.65
MSH5O43196 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC25.33■■□□□ 1.65
MSH5O43196 AL590396.2-201ENST00000636511 1041 ntBASIC25.33■■□□□ 1.65
MSH5O43196 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MSH5O43196 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
MSH5O43196 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
MSH5O43196 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
MSH5O43196 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
MSH5O43196 AL032819.2-201ENST00000624543 2162 ntBASIC25.32■■□□□ 1.64
MSH5O43196 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
MSH5O43196 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
MSH5O43196 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.32■■□□□ 1.64
MSH5O43196 KRT8P36-201ENST00000489121 1440 ntBASIC25.32■■□□□ 1.64
MSH5O43196 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.32■■□□□ 1.64
MSH5O43196 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.32■■□□□ 1.64
MSH5O43196 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 OR51A6P-201ENST00000418680 1004 ntBASIC25.32■■□□□ 1.64
MSH5O43196 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.32■■□□□ 1.64
MSH5O43196 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC25.32■■□□□ 1.64
MSH5O43196 AC018635.1-201ENST00000468292 1030 ntBASIC25.32■■□□□ 1.64
MSH5O43196 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC25.32■■□□□ 1.64
MSH5O43196 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.32■■□□□ 1.64
MSH5O43196 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC25.32■■□□□ 1.64
MSH5O43196 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
MSH5O43196 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.32■■□□□ 1.64
MSH5O43196 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.32■■□□□ 1.64
MSH5O43196 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
MSH5O43196 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC25.31■■□□□ 1.64
MSH5O43196 AC011484.1-201ENST00000377652 1995 ntBASIC25.31■■□□□ 1.64
MSH5O43196 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
MSH5O43196 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.31■■□□□ 1.64
MSH5O43196 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 DUSP5P1-201ENST00000441325 1139 ntBASIC25.31■■□□□ 1.64
MSH5O43196 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC25.31■■□□□ 1.64
MSH5O43196 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 DGCR10-201ENST00000609839 495 ntBASIC25.31■■□□□ 1.64
MSH5O43196 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
MSH5O43196 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.31■■□□□ 1.64
MSH5O43196 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.31■■□□□ 1.64
MSH5O43196 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MSH5O43196 AC018470.1-201ENST00000624790 3129 ntBASIC25.3■■□□□ 1.64
MSH5O43196 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC25.3■■□□□ 1.64
MSH5O43196 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
MSH5O43196 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MSH5O43196 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.3■■□□□ 1.64
MSH5O43196 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MSH5O43196 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.3■■□□□ 1.64
MSH5O43196 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
MSH5O43196 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
MSH5O43196 COPS8-203ENST00000409334 794 ntTSL 5 BASIC25.3■■□□□ 1.64
MSH5O43196 HMGA1P5-201ENST00000412453 271 ntBASIC25.3■■□□□ 1.64
MSH5O43196 PCED1CP-201ENST00000419887 785 ntBASIC25.3■■□□□ 1.64
MSH5O43196 AL450487.1-201ENST00000426799 995 ntBASIC25.3■■□□□ 1.64
MSH5O43196 EAF2-202ENST00000451944 960 ntTSL 2 BASIC25.3■■□□□ 1.64
MSH5O43196 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC25.3■■□□□ 1.64
MSH5O43196 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC25.3■■□□□ 1.64
MSH5O43196 AL139021.1-201ENST00000556734 436 ntTSL 3 BASIC25.3■■□□□ 1.64
MSH5O43196 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.3■■□□□ 1.64
MSH5O43196 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.3■■□□□ 1.64
MSH5O43196 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
MSH5O43196 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms