Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC28A1O00337 CKBP1-201ENST00000565489 1086 ntBASIC18.02■□□□□ 0.48
SLC28A1O00337 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC28A1O00337 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC28A1O00337 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC28A1O00337 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A1O00337 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A1O00337 AL357033.4-201ENST00000617703 1807 ntBASIC18.02■□□□□ 0.47
SLC28A1O00337 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A1O00337 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A1O00337 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A1O00337 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A1O00337 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC28A1O00337 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC28A1O00337 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC28A1O00337 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC28A1O00337 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC28A1O00337 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 NOC2LP1-202ENST00000452600 2235 ntBASIC18.01■□□□□ 0.47
SLC28A1O00337 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 FAM207BP-201ENST00000447172 505 ntBASIC18.01■□□□□ 0.47
SLC28A1O00337 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SLC28A1O00337 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SLC28A1O00337 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 AC073195.1-201ENST00000607241 877 ntBASIC18.01■□□□□ 0.47
SLC28A1O00337 AC130371.2-201ENST00000619443 611 ntBASIC18.01■□□□□ 0.47
SLC28A1O00337 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC28A1O00337 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC28A1O00337 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 AL499627.1-201ENST00000569373 2188 ntBASIC18.01■□□□□ 0.47
SLC28A1O00337 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC28A1O00337 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SLC28A1O00337 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC28A1O00337 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SLC28A1O00337 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 KRT8P45-201ENST00000414328 1447 ntBASIC18■□□□□ 0.47
SLC28A1O00337 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18■□□□□ 0.47
SLC28A1O00337 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18■□□□□ 0.47
SLC28A1O00337 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18■□□□□ 0.47
SLC28A1O00337 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 RPPH1-201ENST00000516869 333 ntBASIC18■□□□□ 0.47
SLC28A1O00337 RARRES2P10-201ENST00000564312 460 ntBASIC18■□□□□ 0.47
SLC28A1O00337 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 AF186192.3-201ENST00000583427 947 ntBASIC18■□□□□ 0.47
SLC28A1O00337 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
SLC28A1O00337 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18■□□□□ 0.47
SLC28A1O00337 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC28A1O00337 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC28A1O00337 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A1O00337 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A1O00337 RCC2P3-201ENST00000418112 1537 ntBASIC17.99■□□□□ 0.47
SLC28A1O00337 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A1O00337 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SLC28A1O00337 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A1O00337 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A1O00337 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC28A1O00337 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A1O00337 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC28A1O00337 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC28A1O00337 AC008040.2-201ENST00000461049 708 ntBASIC17.99■□□□□ 0.47
SLC28A1O00337 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A1O00337 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC28A1O00337 CD99P1-205ENST00000527459 561 ntBASIC17.99■□□□□ 0.47
SLC28A1O00337 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC28A1O00337 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms