Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMX2-CTNND1H3BSU7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TMX2-CTNND1H3BSU7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMX2-CTNND1H3BSU7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 AC104581.1-202ENST00000635932 2618 ntBASIC18.33■□□□□ 0.53
TMX2-CTNND1H3BSU7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 KRT18P48-201ENST00000434763 852 ntBASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 KRT126P-201ENST00000549467 1181 ntBASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.33■□□□□ 0.52
TMX2-CTNND1H3BSU7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 KRT8P45-201ENST00000414328 1447 ntBASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 AL136038.3-201ENST00000561909 1096 ntBASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 AC116407.4-201ENST00000623319 1061 ntBASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.32■□□□□ 0.52
TMX2-CTNND1H3BSU7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 AC106820.2-201ENST00000563775 3264 ntBASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 STARP1-201ENST00000397973 869 ntBASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 KRT8P11-201ENST00000409686 1436 ntBASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TMX2-CTNND1H3BSU7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 VENTXP5-201ENST00000523979 775 ntBASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
TMX2-CTNND1H3BSU7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms