Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 AC135776.1-201ENST00000319817 2481 ntBASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 KRT8P32-201ENST00000512863 1461 ntBASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM49D1C9J1S8 KRT8P11-201ENST00000409686 1436 ntBASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 AC008403.3-201ENST00000598924 454 ntBASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM49D1C9J1S8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 FZD10-202ENST00000539839 3282 ntBASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM49D1C9J1S8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 AC142086.2-201ENST00000569753 217 ntBASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 MTDHP1-201ENST00000605323 784 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms