Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 YBX1P5-201ENST00000509441 847 ntBASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 SPCS2P1-201ENST00000561636 679 ntBASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 AP002472.1-201ENST00000577490 586 ntBASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 AC005336.2-201ENST00000593183 939 ntBASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 AC025062.2-201ENST00000605477 670 ntBASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 AC106028.4-201ENST00000614509 607 ntBASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM88BA6NKF7 AL512353.2-201ENST00000448759 1962 ntBASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 AC112777.1-201ENST00000540175 1423 ntBASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 AC034236.2-201ENST00000606662 1610 ntBASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 AL356309.3-201ENST00000624132 1934 ntBASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM88BA6NKF7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 MCCD1P2-201ENST00000423228 335 ntBASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 INTS4P1-201ENST00000438455 1935 ntBASIC21.67■■□□□ 1.06
TMEM88BA6NKF7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 AC009533.2-201ENST00000543664 586 ntBASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 MIR4469-201ENST00000583919 79 ntBASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM88BA6NKF7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 AC006333.2-201ENST00000607957 2099 ntBASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 AL691432.2-201ENST00000607222 2038 ntBASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 AC009947.1-201ENST00000444350 727 ntBASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms