Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AP003733.1-201ENST00000491725 852 ntBASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L4A6NDZ8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 AP002414.4-201ENST00000589764 1148 ntBASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 AC005332.7-201ENST00000614046 2005 ntBASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MBD3L4A6NDZ8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 Z83836.1-201ENST00000624605 1642 ntBASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 MIR3652-201ENST00000579335 131 ntBASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 AL390719.2-201ENST00000606993 987 ntBASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
MBD3L4A6NDZ8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 KRT89P-201ENST00000620027 1478 ntBASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 AC005332.3-201ENST00000589904 676 ntBASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 AC024563.2-201ENST00000603282 481 ntBASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MBD3L4A6NDZ8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms