Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 KRT8P7-201ENST00000533003 1432 ntBASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CCDC196A0A1B0GTZ2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CCDC196A0A1B0GTZ2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.7■■□□□ 1.07
CCDC196A0A1B0GTZ2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 AP000593.1-201ENST00000393668 712 ntBASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC133561.5-201ENST00000635547 218 ntBASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC097493.4-201ENST00000641197 219 ntBASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC196A0A1B0GTZ2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC196A0A1B0GTZ2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC012306.2-201ENST00000609350 630 ntBASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 HOXB1-202ENST00000577092 1414 ntBASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 WIZP1-201ENST00000531444 2299 ntBASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC196A0A1B0GTZ2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 AL020996.1-203ENST00000536896 2307 ntBASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms