Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 TEX21P-204ENST00000641479 1693 ntBASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 AC099336.1-202ENST00000602961 463 ntBASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 LINC00167-201ENST00000530583 1419 ntBASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 VENTXP7-201ENST00000475503 772 ntBASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 AC106795.1-205ENST00000512851 1056 ntBASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 GUSBP12-201ENST00000513727 720 ntBASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 AP002469.2-201ENST00000531724 424 ntBASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 KRT8P32-201ENST00000512863 1461 ntBASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC187A0A096LP49 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 AC112907.3-201ENST00000577781 2400 ntBASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 AC009065.1-201ENST00000564055 1225 ntBASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 AC024563.2-201ENST00000603282 481 ntBASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 AL121912.1-201ENST00000603683 238 ntBASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 AL353801.3-201ENST00000609898 542 ntBASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC187A0A096LP49 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms