Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC9.71□□□□□ -0.86
LINC01558Q9Y6Z2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 RPS2P7-201ENST00000447334 885 ntBASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 LYSMD4-203ENST00000378904 2122 ntBASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01558Q9Y6Z2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 IRX1P1-201ENST00000438849 1838 ntBASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms