Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA6Q9Y5G7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 AP003041.3-201ENST00000527151 707 ntBASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 AL121956.5-201ENST00000625261 221 ntBASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGA6Q9Y5G7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA6Q9Y5G7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGA6Q9Y5G7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.02■□□□□ 0.47
PCDHGA6Q9Y5G7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA6Q9Y5G7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
PCDHGA6Q9Y5G7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PCDHGA6Q9Y5G7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGA6Q9Y5G7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 AP000550.4-202ENST00000639755 178 ntBASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA6Q9Y5G7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 AC008622.2-201ENST00000617006 1229 ntBASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 AL049812.1-201ENST00000432563 2267 ntBASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHGA6Q9Y5G7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 AP000523.1-201ENST00000398242 1049 ntBASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA6Q9Y5G7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms