Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 BX088651.1-201ENST00000540551 451 ntBASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 AC073195.1-201ENST00000607241 877 ntBASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 BICD1-207ENST00000551848 1962 ntBASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGB3Q9Y5G1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 NIFKP9-201ENST00000419265 221 ntBASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 KSR1P1-201ENST00000446298 240 ntBASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB3Q9Y5G1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB3Q9Y5G1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHGB3Q9Y5G1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PCDHGB3Q9Y5G1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB3Q9Y5G1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB3Q9Y5G1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB3Q9Y5G1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB3Q9Y5G1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms