Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 SLC25A1P2-201ENST00000430693 912 ntBASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 AL031598.1-201ENST00000561511 1773 ntBASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB3Q9Y5E6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 AC093525.10-201ENST00000625130 1569 ntBASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 CCR12P-201ENST00000446203 998 ntBASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 AC010203.1-204ENST00000548782 407 ntBASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 AC116562.4-202ENST00000641738 218 ntBASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 AC135050.7-201ENST00000624508 2218 ntBASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB3Q9Y5E6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 BX664615.1-201ENST00000443558 458 ntBASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB3Q9Y5E6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHB3Q9Y5E6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB3Q9Y5E6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB3Q9Y5E6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB3Q9Y5E6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB3Q9Y5E6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB3Q9Y5E6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB3Q9Y5E6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB3Q9Y5E6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms