Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 AL109659.2-201ENST00000606809 1674 ntBASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
ZC3H4Q9UPT8 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 LINC01521-201ENST00000504184 1943 ntBASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.61■■□□□ 1.21
ZC3H4Q9UPT8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 MIR3687-2-201ENST00000577708 61 ntBASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 AL356488.2-201ENST00000602755 427 ntBASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 AC024563.2-201ENST00000603282 481 ntBASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 MIR3687-1-201ENST00000614492 61 ntBASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZC3H4Q9UPT8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 FGFR3P6-201ENST00000457012 610 ntBASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZC3H4Q9UPT8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 YBX2P1-201ENST00000394192 760 ntBASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 AL353692.3-201ENST00000407031 1396 ntBASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 AC104109.2-201ENST00000602919 1418 ntBASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
ZC3H4Q9UPT8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
ZC3H4Q9UPT8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 AC040169.1-201ENST00000565382 521 ntBASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms