Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 HBZP1-201ENST00000354915 429 ntBASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 KRT18P23-201ENST00000435622 1283 ntBASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 IER3-202ENST00000376377 1350 ntBASIC16.64■□□□□ 0.25
CLCF1Q9UBD9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 UPK3BP1-201ENST00000428678 509 ntBASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 SPDYE13P-201ENST00000445314 798 ntBASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 VENTXP5-201ENST00000523979 775 ntBASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 AC116407.4-201ENST00000623319 1061 ntBASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLCF1Q9UBD9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 AC092597.1-201ENST00000487352 616 ntBASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 MIR3917-201ENST00000580971 93 ntBASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 AC005332.7-201ENST00000614046 2005 ntBASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLCF1Q9UBD9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 AC034236.2-201ENST00000606662 1610 ntBASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCF1Q9UBD9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms