Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.52■□□□□ 0.4
CNIH4Q9P003 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.52■□□□□ 0.4
CNIH4Q9P003 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CNIH4Q9P003 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.52■□□□□ 0.4
CNIH4Q9P003 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH4Q9P003 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CNIH4Q9P003 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNIH4Q9P003 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.52■□□□□ 0.4
CNIH4Q9P003 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.52■□□□□ 0.4
CNIH4Q9P003 KRT8P11-201ENST00000409686 1436 ntBASIC17.52■□□□□ 0.4
CNIH4Q9P003 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.52■□□□□ 0.4
CNIH4Q9P003 AC009113.1-201ENST00000570267 2443 ntBASIC17.52■□□□□ 0.4
CNIH4Q9P003 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH4Q9P003 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.52■□□□□ 0.39
CNIH4Q9P003 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CNIH4Q9P003 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.52■□□□□ 0.39
CNIH4Q9P003 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH4Q9P003 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH4Q9P003 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNIH4Q9P003 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 AC116562.4-202ENST00000641738 218 ntBASIC17.51■□□□□ 0.39
CNIH4Q9P003 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CNIH4Q9P003 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNIH4Q9P003 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 TSPY17P-201ENST00000450329 467 ntBASIC17.5■□□□□ 0.39
CNIH4Q9P003 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 AC005363.2-201ENST00000618631 242 ntBASIC17.5■□□□□ 0.39
CNIH4Q9P003 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNIH4Q9P003 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNIH4Q9P003 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.49■□□□□ 0.39
CNIH4Q9P003 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CNIH4Q9P003 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNIH4Q9P003 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms