Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TFCP2L1Q9NZI6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TFCP2L1Q9NZI6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TFCP2L1Q9NZI6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 AC027796.2-201ENST00000575326 344 ntBASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 AC140113.2-201ENST00000604370 208 ntBASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TFCP2L1Q9NZI6 AC096582.2-201ENST00000510860 516 ntBASIC23.68■■□□□ 1.38
TFCP2L1Q9NZI6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.68■■□□□ 1.38
TFCP2L1Q9NZI6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TFCP2L1Q9NZI6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TFCP2L1Q9NZI6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TFCP2L1Q9NZI6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TFCP2L1Q9NZI6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TFCP2L1Q9NZI6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TFCP2L1Q9NZI6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 AC098831.1-202ENST00000438821 336 ntBASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 TREX1-205ENST00000625293 1783 ntBASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TFCP2L1Q9NZI6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 AL512353.2-201ENST00000448759 1962 ntBASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 UPF3AP3-201ENST00000420996 769 ntBASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TFCP2L1Q9NZI6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 HNRNPDP1-201ENST00000439535 754 ntBASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 MIR3180-4-201ENST00000582223 153 ntBASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 AC114341.1-201ENST00000618070 349 ntBASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TFCP2L1Q9NZI6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TFCP2L1Q9NZI6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TFCP2L1Q9NZI6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TFCP2L1Q9NZI6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.64■■□□□ 1.38
TFCP2L1Q9NZI6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
TFCP2L1Q9NZI6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
TFCP2L1Q9NZI6 RPS2P28-201ENST00000314255 741 ntBASIC23.64■■□□□ 1.37
TFCP2L1Q9NZI6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.64■■□□□ 1.37
TFCP2L1Q9NZI6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.64■■□□□ 1.37
TFCP2L1Q9NZI6 SCARNA2-201ENST00000458748 420 ntBASIC23.64■■□□□ 1.37
TFCP2L1Q9NZI6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms