Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 AL353807.1-201ENST00000427475 662 ntBASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 AF186192.3-201ENST00000583427 947 ntBASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 KRT8P3-201ENST00000519669 1449 ntBASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 AL359736.2-201ENST00000621992 437 ntBASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 AL031985.4-201ENST00000642138 673 ntBASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 AC073592.3-201ENST00000625118 1834 ntBASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 AL133373.2-201ENST00000623187 2828 ntBASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.29■□□□□ 0.84
NLRC4Q9NPP4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 AC011506.1-201ENST00000474329 610 ntBASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 FAM197Y4-202ENST00000622692 608 ntBASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLRC4Q9NPP4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 HCG11-201ENST00000411553 5696 ntBASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 AC005332.8-201ENST00000622750 2735 ntBASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms