Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.68■■□□□ 1.06
GPCPD1Q9NPB8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GPCPD1Q9NPB8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPCPD1Q9NPB8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
GPCPD1Q9NPB8 AC120498.9-201ENST00000339021 3867 ntBASIC21.68■■□□□ 1.06
GPCPD1Q9NPB8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 AC006333.2-201ENST00000607957 2099 ntBASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 HEIH-201ENST00000623091 1652 ntBASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 LINC01311-201ENST00000565162 1445 ntBASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 FAM86EP-206ENST00000510506 987 ntBASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 AC083849.1-201ENST00000615227 514 ntBASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 AL157888.1-201ENST00000631930 593 ntBASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPCPD1Q9NPB8 AL357033.4-201ENST00000617703 1807 ntBASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 AL121956.5-201ENST00000625261 221 ntBASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.66■■□□□ 1.06
GPCPD1Q9NPB8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 AC034232.1-201ENST00000506026 1064 ntBASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 MTMR9LP-203ENST00000426597 1545 ntBASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
GPCPD1Q9NPB8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
GPCPD1Q9NPB8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GPCPD1Q9NPB8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
GPCPD1Q9NPB8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
GPCPD1Q9NPB8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GPCPD1Q9NPB8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 PCED1CP-201ENST00000419887 785 ntBASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 ZNF444P1-201ENST00000559497 298 ntBASIC21.64■■□□□ 1.05
GPCPD1Q9NPB8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms