Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX8Q9HC52 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX8Q9HC52 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX8Q9HC52 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX8Q9HC52 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 MYC-209ENST00000641252 345 ntBASIC20.91■□□□□ 0.94
CBX8Q9HC52 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX8Q9HC52 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CBX8Q9HC52 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 KRT8P32-201ENST00000512863 1461 ntBASIC20.9■□□□□ 0.94
CBX8Q9HC52 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.9■□□□□ 0.94
CBX8Q9HC52 AC083906.2-201ENST00000511578 360 ntBASIC20.9■□□□□ 0.94
CBX8Q9HC52 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 AC060766.5-201ENST00000590539 871 ntBASIC20.9■□□□□ 0.94
CBX8Q9HC52 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.9■□□□□ 0.94
CBX8Q9HC52 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX8Q9HC52 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CBX8Q9HC52 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CBX8Q9HC52 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CBX8Q9HC52 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.89■□□□□ 0.94
CBX8Q9HC52 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CBX8Q9HC52 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.89■□□□□ 0.94
CBX8Q9HC52 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CBX8Q9HC52 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX8Q9HC52 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CBX8Q9HC52 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 SLC25A6P5-201ENST00000435663 894 ntBASIC20.89■□□□□ 0.93
CBX8Q9HC52 AC026185.1-201ENST00000445748 174 ntBASIC20.89■□□□□ 0.93
CBX8Q9HC52 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX8Q9HC52 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CBX8Q9HC52 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CBX8Q9HC52 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX8Q9HC52 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CBX8Q9HC52 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
CBX8Q9HC52 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 AL357033.4-201ENST00000617703 1807 ntBASIC20.88■□□□□ 0.93
CBX8Q9HC52 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 SOX15-203ENST00000570788 1093 ntBASIC20.88■□□□□ 0.93
CBX8Q9HC52 AC008687.6-201ENST00000596318 630 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms