Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH2D4AQ9H788 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH2D4AQ9H788 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.8■■□□□ 1.08
SH2D4AQ9H788 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH2D4AQ9H788 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH2D4AQ9H788 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH2D4AQ9H788 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH2D4AQ9H788 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 AC011498.5-201ENST00000592027 486 ntBASIC21.79■■□□□ 1.08
SH2D4AQ9H788 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH2D4AQ9H788 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 AL158211.5-201ENST00000623583 2518 ntBASIC21.78■■□□□ 1.08
SH2D4AQ9H788 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 MIR3180-4-201ENST00000582223 153 ntBASIC21.78■■□□□ 1.08
SH2D4AQ9H788 AL121672.3-201ENST00000608644 468 ntBASIC21.78■■□□□ 1.08
SH2D4AQ9H788 AC079602.3-201ENST00000623931 403 ntBASIC21.78■■□□□ 1.08
SH2D4AQ9H788 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SH2D4AQ9H788 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 BX276092.5-203ENST00000456199 560 ntBASIC21.77■■□□□ 1.08
SH2D4AQ9H788 KRT126P-201ENST00000549467 1181 ntBASIC21.77■■□□□ 1.08
SH2D4AQ9H788 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 AL391807.1-203ENST00000604392 2365 ntBASIC21.77■■□□□ 1.08
SH2D4AQ9H788 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.77■■□□□ 1.08
SH2D4AQ9H788 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SH2D4AQ9H788 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 AL162741.1-201ENST00000565563 1558 ntBASIC21.76■■□□□ 1.07
SH2D4AQ9H788 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 AC093525.10-201ENST00000625130 1569 ntBASIC21.76■■□□□ 1.07
SH2D4AQ9H788 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH2D4AQ9H788 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH2D4AQ9H788 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH2D4AQ9H788 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.75■■□□□ 1.07
SH2D4AQ9H788 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.75■■□□□ 1.07
SH2D4AQ9H788 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SH2D4AQ9H788 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH2D4AQ9H788 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SH2D4AQ9H788 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SH2D4AQ9H788 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms