Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.07■■□□□ 1.12
RNF41Q9H4P4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 AC112497.1-201ENST00000624824 639 ntBASIC22.07■■□□□ 1.12
RNF41Q9H4P4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF41Q9H4P4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.07■■□□□ 1.12
RNF41Q9H4P4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 AC117947.1-201ENST00000427448 529 ntBASIC22.06■■□□□ 1.12
RNF41Q9H4P4 KRT18P23-201ENST00000435622 1283 ntBASIC22.06■■□□□ 1.12
RNF41Q9H4P4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 KRT18P41-201ENST00000518924 1277 ntBASIC22.06■■□□□ 1.12
RNF41Q9H4P4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 AC139887.4-201ENST00000607877 719 ntBASIC22.06■■□□□ 1.12
RNF41Q9H4P4 AC006011.2-201ENST00000621313 1158 ntBASIC22.06■■□□□ 1.12
RNF41Q9H4P4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF41Q9H4P4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 YBX1P2-201ENST00000489612 999 ntBASIC22.05■■□□□ 1.12
RNF41Q9H4P4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF41Q9H4P4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 AL023973.1-201ENST00000624619 620 ntBASIC22.04■■□□□ 1.12
RNF41Q9H4P4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF41Q9H4P4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 AK4P3-201ENST00000418260 669 ntBASIC22.03■■□□□ 1.12
RNF41Q9H4P4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 AC104076.2-201ENST00000448912 469 ntBASIC22.03■■□□□ 1.12
RNF41Q9H4P4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RNF41Q9H4P4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms