Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 PDPK2P-202ENST00000562415 1191 ntBASIC17.79■□□□□ 0.44
SPTBN4Q9H254 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 AP005018.1-201ENST00000525475 301 ntBASIC17.78■□□□□ 0.44
SPTBN4Q9H254 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 MIR661-201ENST00000384842 89 ntBASIC17.78■□□□□ 0.44
SPTBN4Q9H254 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 CEND1P1-201ENST00000451006 455 ntBASIC17.78■□□□□ 0.44
SPTBN4Q9H254 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 AL139288.1-201ENST00000623748 933 ntBASIC17.78■□□□□ 0.44
SPTBN4Q9H254 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPTBN4Q9H254 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.77■□□□□ 0.44
SPTBN4Q9H254 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPTBN4Q9H254 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPTBN4Q9H254 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPTBN4Q9H254 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPTBN4Q9H254 PMS2P4-201ENST00000412466 1052 ntBASIC17.77■□□□□ 0.43
SPTBN4Q9H254 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.77■□□□□ 0.43
SPTBN4Q9H254 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.77■□□□□ 0.43
SPTBN4Q9H254 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPTBN4Q9H254 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SPTBN4Q9H254 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC109322.1-201ENST00000524499 1264 ntBASIC17.76■□□□□ 0.43
SPTBN4Q9H254 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC121338.2-201ENST00000622535 1744 ntBASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AP001271.2-201ENST00000624018 1556 ntBASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC107918.4-202ENST00000641623 219 ntBASIC17.76■□□□□ 0.43
SPTBN4Q9H254 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC097374.2-201ENST00000618617 1306 ntBASIC17.76■□□□□ 0.43
SPTBN4Q9H254 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AP000344.2-201ENST00000512987 629 ntBASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC018845.2-201ENST00000568326 409 ntBASIC17.76■□□□□ 0.43
SPTBN4Q9H254 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPTBN4Q9H254 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 RCN1P2-201ENST00000398357 915 ntBASIC17.75■□□□□ 0.43
SPTBN4Q9H254 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 CR383656.12-201ENST00000549567 513 ntBASIC17.75■□□□□ 0.43
SPTBN4Q9H254 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms