Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 AC131212.4-201ENST00000623606 975 ntBASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 AC073592.3-201ENST00000625118 1834 ntBASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 ABALON-201ENST00000629058 1903 ntBASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 AL353708.3-201ENST00000610272 989 ntBASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2J3Q9H1A7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 AC110285.5-201ENST00000611501 352 ntBASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 AL023875.1-201ENST00000640777 796 ntBASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 MYC-208ENST00000641036 567 ntBASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 RCC2P6-201ENST00000526625 1557 ntBASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
POLR2J3Q9H1A7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms