Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 NKAPP1-205ENST00000585790 367 ntBASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
COL25A1Q9BXS0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
COL25A1Q9BXS0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 NME2P1-201ENST00000426182 414 ntBASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.89■□□□□ 0.61
COL25A1Q9BXS0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 AC079834.2-201ENST00000609776 1949 ntBASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 LINC02560-201ENST00000596379 459 ntBASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 AC008761.3-201ENST00000624803 892 ntBASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 LINC00628-201ENST00000628516 1289 ntBASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 PGM5P2-202ENST00000637225 1043 ntBASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL25A1Q9BXS0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 BASP1P1-201ENST00000430708 665 ntBASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 UGT1A2P-201ENST00000454886 866 ntBASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL25A1Q9BXS0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms