Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXC2Q99958 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 NUS1P2-201ENST00000417358 873 ntBASIC15.74■□□□□ 0.11
FOXC2Q99958 HMGN1P19-201ENST00000436976 333 ntBASIC15.74■□□□□ 0.11
FOXC2Q99958 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.74■□□□□ 0.11
FOXC2Q99958 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXC2Q99958 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.74■□□□□ 0.11
FOXC2Q99958 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FOXC2Q99958 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.74■□□□□ 0.11
FOXC2Q99958 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
FOXC2Q99958 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.74■□□□□ 0.11
FOXC2Q99958 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.74■□□□□ 0.11
FOXC2Q99958 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
FOXC2Q99958 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXC2Q99958 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
FOXC2Q99958 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FOXC2Q99958 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 ZNF259P1-201ENST00000407656 1365 ntBASIC15.74■□□□□ 0.11
FOXC2Q99958 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXC2Q99958 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
FOXC2Q99958 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXC2Q99958 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
FOXC2Q99958 POM121L3P-201ENST00000419331 1163 ntBASIC15.73■□□□□ 0.11
FOXC2Q99958 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXC2Q99958 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.73■□□□□ 0.11
FOXC2Q99958 GPR32P1-201ENST00000601788 811 ntBASIC15.73■□□□□ 0.11
FOXC2Q99958 AL592071.1-201ENST00000611956 408 ntBASIC15.73■□□□□ 0.11
FOXC2Q99958 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FOXC2Q99958 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXC2Q99958 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXC2Q99958 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXC2Q99958 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXC2Q99958 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXC2Q99958 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXC2Q99958 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
FOXC2Q99958 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXC2Q99958 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXC2Q99958 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXC2Q99958 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
FOXC2Q99958 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
FOXC2Q99958 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXC2Q99958 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXC2Q99958 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXC2Q99958 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXC2Q99958 AL691403.2-201ENST00000618460 490 ntBASIC15.72■□□□□ 0.11
FOXC2Q99958 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXC2Q99958 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
FOXC2Q99958 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXC2Q99958 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
FOXC2Q99958 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXC2Q99958 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXC2Q99958 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
FOXC2Q99958 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms