Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.47□□□□□ -0.41
LITAFQ99732 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.47□□□□□ -0.41
LITAFQ99732 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LITAFQ99732 AC006116.8-202ENST00000587620 1550 ntBASIC12.47□□□□□ -0.41
LITAFQ99732 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.47□□□□□ -0.41
LITAFQ99732 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.47□□□□□ -0.41
LITAFQ99732 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LITAFQ99732 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.46□□□□□ -0.41
LITAFQ99732 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
LITAFQ99732 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LITAFQ99732 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.46□□□□□ -0.41
LITAFQ99732 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 AC008556.1-201ENST00000610908 2040 ntBASIC12.46□□□□□ -0.41
LITAFQ99732 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LITAFQ99732 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LITAFQ99732 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.46□□□□□ -0.41
LITAFQ99732 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC12.46□□□□□ -0.41
LITAFQ99732 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.46□□□□□ -0.41
LITAFQ99732 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LITAFQ99732 MYC-208ENST00000641036 567 ntBASIC12.46□□□□□ -0.41
LITAFQ99732 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.46□□□□□ -0.41
LITAFQ99732 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LITAFQ99732 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
LITAFQ99732 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
LITAFQ99732 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
LITAFQ99732 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.46□□□□□ -0.42
LITAFQ99732 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
LITAFQ99732 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LITAFQ99732 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.46□□□□□ -0.42
LITAFQ99732 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LITAFQ99732 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.45□□□□□ -0.42
LITAFQ99732 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.45□□□□□ -0.42
LITAFQ99732 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 PARP1-202ENST00000366792 553 ntTSL 3 BASIC12.45□□□□□ -0.42
LITAFQ99732 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 TSPY21P-201ENST00000433481 731 ntBASIC12.45□□□□□ -0.42
LITAFQ99732 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LITAFQ99732 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC12.45□□□□□ -0.42
LITAFQ99732 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.45□□□□□ -0.42
LITAFQ99732 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
LITAFQ99732 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.45□□□□□ -0.42
LITAFQ99732 AC011270.2-201ENST00000624293 2550 ntBASIC12.45□□□□□ -0.42
LITAFQ99732 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.45□□□□□ -0.42
LITAFQ99732 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LITAFQ99732 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LITAFQ99732 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms