Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 IGHV3-41-201ENST00000613121 348 ntBASIC26.86■■□□□ 1.89
SCAF11Q99590 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF11Q99590 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF11Q99590 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF11Q99590 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SCAF11Q99590 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCAF11Q99590 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCAF11Q99590 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCAF11Q99590 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCAF11Q99590 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC26.85■■□□□ 1.89
SCAF11Q99590 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC26.85■■□□□ 1.89
SCAF11Q99590 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SCAF11Q99590 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SCAF11Q99590 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC26.85■■□□□ 1.89
SCAF11Q99590 AC104390.1-201ENST00000555663 520 ntBASIC26.85■■□□□ 1.89
SCAF11Q99590 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC26.85■■□□□ 1.89
SCAF11Q99590 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
SCAF11Q99590 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCAF11Q99590 HOXB1-202ENST00000577092 1414 ntBASIC26.85■■□□□ 1.89
SCAF11Q99590 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SCAF11Q99590 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SCAF11Q99590 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
SCAF11Q99590 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.84■■□□□ 1.89
SCAF11Q99590 AL031284.1-201ENST00000419297 478 ntBASIC26.84■■□□□ 1.89
SCAF11Q99590 BX842568.4-201ENST00000421222 227 ntBASIC26.84■■□□□ 1.89
SCAF11Q99590 KRT18P23-201ENST00000435622 1283 ntBASIC26.84■■□□□ 1.89
SCAF11Q99590 AC091607.1-201ENST00000490318 1060 ntBASIC26.84■■□□□ 1.89
SCAF11Q99590 POLD2P1-201ENST00000511220 997 ntBASIC26.84■■□□□ 1.89
SCAF11Q99590 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC26.84■■□□□ 1.89
SCAF11Q99590 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.84■■□□□ 1.89
SCAF11Q99590 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC26.84■■□□□ 1.89
SCAF11Q99590 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SCAF11Q99590 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SCAF11Q99590 TEX21P-204ENST00000641479 1693 ntBASIC26.84■■□□□ 1.89
SCAF11Q99590 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC26.84■■□□□ 1.89
SCAF11Q99590 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC26.84■■□□□ 1.89
SCAF11Q99590 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
SCAF11Q99590 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC26.84■■□□□ 1.89
SCAF11Q99590 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
SCAF11Q99590 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SCAF11Q99590 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.89
SCAF11Q99590 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
SCAF11Q99590 RNPS1P1-201ENST00000507437 918 ntBASIC26.83■■□□□ 1.89
SCAF11Q99590 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC26.83■■□□□ 1.89
SCAF11Q99590 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC26.83■■□□□ 1.89
SCAF11Q99590 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC26.83■■□□□ 1.89
SCAF11Q99590 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SCAF11Q99590 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
SCAF11Q99590 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SCAF11Q99590 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
SCAF11Q99590 IGHGP-201ENST00000390555 1178 ntBASIC26.82■■□□□ 1.88
SCAF11Q99590 RN7SL606P-201ENST00000472779 293 ntBASIC26.82■■□□□ 1.88
SCAF11Q99590 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC26.82■■□□□ 1.88
SCAF11Q99590 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.82■■□□□ 1.88
SCAF11Q99590 AC106730.1-201ENST00000566722 1090 ntBASIC26.82■■□□□ 1.88
SCAF11Q99590 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC26.82■■□□□ 1.88
SCAF11Q99590 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC26.82■■□□□ 1.88
SCAF11Q99590 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SCAF11Q99590 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SCAF11Q99590 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
SCAF11Q99590 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
SCAF11Q99590 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
SCAF11Q99590 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC26.82■■□□□ 1.88
SCAF11Q99590 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
SCAF11Q99590 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 MED22-202ENST00000371999 987 ntTSL 3 BASIC26.81■■□□□ 1.88
SCAF11Q99590 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC26.81■■□□□ 1.88
SCAF11Q99590 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC26.81■■□□□ 1.88
SCAF11Q99590 AC148477.8-201ENST00000624298 468 ntBASIC26.81■■□□□ 1.88
SCAF11Q99590 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SCAF11Q99590 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SCAF11Q99590 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SCAF11Q99590 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
SCAF11Q99590 POLI-202ENST00000406285 2030 ntTSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
SCAF11Q99590 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 KRT8P7-201ENST00000533003 1432 ntBASIC26.81■■□□□ 1.88
SCAF11Q99590 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC26.81■■□□□ 1.88
SCAF11Q99590 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
SCAF11Q99590 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SCAF11Q99590 FAM197Y8-203ENST00000450145 560 ntBASIC26.81■■□□□ 1.88
SCAF11Q99590 AC018712.1-201ENST00000455767 687 ntBASIC26.81■■□□□ 1.88
SCAF11Q99590 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
SCAF11Q99590 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SCAF11Q99590 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SCAF11Q99590 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms