Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 AL359736.2-201ENST00000621992 437 ntBASIC17.04■□□□□ 0.32
SNX18Q96RF0 AC083906.6-201ENST00000641366 219 ntBASIC17.04■□□□□ 0.32
SNX18Q96RF0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 AC011270.2-201ENST00000624293 2550 ntBASIC17.04■□□□□ 0.32
SNX18Q96RF0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SNX18Q96RF0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX18Q96RF0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 AC233263.1-201ENST00000578059 224 ntBASIC17.03■□□□□ 0.32
SNX18Q96RF0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 AC069544.1-201ENST00000609399 999 ntBASIC17.03■□□□□ 0.32
SNX18Q96RF0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX18Q96RF0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SNX18Q96RF0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.02■□□□□ 0.32
SNX18Q96RF0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.02■□□□□ 0.32
SNX18Q96RF0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX18Q96RF0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SNX18Q96RF0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.02■□□□□ 0.31
SNX18Q96RF0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNX18Q96RF0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX18Q96RF0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.02■□□□□ 0.31
SNX18Q96RF0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX18Q96RF0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.02■□□□□ 0.31
SNX18Q96RF0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX18Q96RF0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX18Q96RF0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX18Q96RF0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX18Q96RF0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX18Q96RF0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX18Q96RF0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX18Q96RF0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms