Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 AC092647.4-201ENST00000457211 535 ntBASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 SLC25A1P4-201ENST00000567977 778 ntBASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 AC090164.3-201ENST00000610780 2143 ntBASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPGRIP1Q96KN7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 KRT8P20-201ENST00000423953 1409 ntBASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 HMGA1P5-201ENST00000412453 271 ntBASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 AC026396.1-201ENST00000419388 421 ntBASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 C1QL1P1-201ENST00000568105 661 ntBASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 AC104581.1-202ENST00000635932 2618 ntBASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RPGRIP1Q96KN7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 AC093458.2-201ENST00000623150 629 ntBASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPGRIP1Q96KN7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 AP006587.1-201ENST00000534129 1502 ntBASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 YBX1P2-201ENST00000489612 999 ntBASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 AC141586.3-201ENST00000562166 1838 ntBASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPGRIP1Q96KN7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms