Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 RPS2P4-201ENST00000476944 856 ntBASIC18.92■□□□□ 0.62
LRRC39Q96DD0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 CKBP1-201ENST00000565489 1086 ntBASIC18.92■□□□□ 0.62
LRRC39Q96DD0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC39Q96DD0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 KRT16P1-201ENST00000399124 1418 ntBASIC18.91■□□□□ 0.62
LRRC39Q96DD0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.91■□□□□ 0.62
LRRC39Q96DD0 AL031985.4-201ENST00000642138 673 ntBASIC18.91■□□□□ 0.62
LRRC39Q96DD0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC39Q96DD0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 KRT18P41-201ENST00000518924 1277 ntBASIC18.9■□□□□ 0.62
LRRC39Q96DD0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 AC018470.1-201ENST00000624790 3129 ntBASIC18.9■□□□□ 0.62
LRRC39Q96DD0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC39Q96DD0 RCC2P3-201ENST00000418112 1537 ntBASIC18.9■□□□□ 0.62
LRRC39Q96DD0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 AC011298.2-201ENST00000617989 482 ntBASIC18.89■□□□□ 0.61
LRRC39Q96DD0 AC073648.6-201ENST00000641589 218 ntBASIC18.89■□□□□ 0.61
LRRC39Q96DD0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms