Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.33■□□□□ 0.37
CTHRC1Q96CG8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 AL138966.2-201ENST00000621997 464 ntBASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTHRC1Q96CG8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 AC005082.1-201ENST00000413042 2259 ntBASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 NEK4P2-201ENST00000580004 1012 ntBASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 AC120498.9-201ENST00000339021 3867 ntBASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTHRC1Q96CG8 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 KRT18P23-201ENST00000435622 1283 ntBASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms