Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCAMP4Q969E2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.58■□□□□ 0.57
SCAMP4Q969E2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.58■□□□□ 0.57
SCAMP4Q969E2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.58■□□□□ 0.57
SCAMP4Q969E2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.58■□□□□ 0.57
SCAMP4Q969E2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.58■□□□□ 0.57
SCAMP4Q969E2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 TSPY5P-201ENST00000426936 936 ntBASIC18.58■□□□□ 0.56
SCAMP4Q969E2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 GCSHP2-201ENST00000560971 527 ntBASIC18.58■□□□□ 0.56
SCAMP4Q969E2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 AC024243.1-201ENST00000609234 778 ntBASIC18.58■□□□□ 0.56
SCAMP4Q969E2 AL031432.5-201ENST00000641059 760 ntBASIC18.58■□□□□ 0.56
SCAMP4Q969E2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAMP4Q969E2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 AP000523.1-201ENST00000398242 1049 ntBASIC18.57■□□□□ 0.56
SCAMP4Q969E2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 AC098818.2-201ENST00000564925 2320 ntBASIC18.57■□□□□ 0.56
SCAMP4Q969E2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAMP4Q969E2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.56■□□□□ 0.56
SCAMP4Q969E2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 AC063952.2-201ENST00000498792 1227 ntBASIC18.56■□□□□ 0.56
SCAMP4Q969E2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAMP4Q969E2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 AC112497.1-201ENST00000624824 639 ntBASIC18.55■□□□□ 0.56
SCAMP4Q969E2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 Z98044.1-201ENST00000632503 1764 ntBASIC18.55■□□□□ 0.56
SCAMP4Q969E2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.55■□□□□ 0.56
SCAMP4Q969E2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SCAMP4Q969E2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAMP4Q969E2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCAMP4Q969E2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.54■□□□□ 0.56
SCAMP4Q969E2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAMP4Q969E2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAMP4Q969E2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms