Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP9XQ93008 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
USP9XQ93008 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP9XQ93008 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.27■□□□□ 0.2
USP9XQ93008 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.27■□□□□ 0.2
USP9XQ93008 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.27■□□□□ 0.2
USP9XQ93008 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.27■□□□□ 0.2
USP9XQ93008 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.27■□□□□ 0.2
USP9XQ93008 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.27■□□□□ 0.2
USP9XQ93008 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.27■□□□□ 0.2
USP9XQ93008 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
USP9XQ93008 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP9XQ93008 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USP9XQ93008 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.27■□□□□ 0.19
USP9XQ93008 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP9XQ93008 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
USP9XQ93008 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP9XQ93008 AC104390.1-201ENST00000555663 520 ntBASIC16.27■□□□□ 0.19
USP9XQ93008 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.27■□□□□ 0.19
USP9XQ93008 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.26■□□□□ 0.19
USP9XQ93008 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 AP005117.1-201ENST00000584346 1413 ntBASIC16.26■□□□□ 0.19
USP9XQ93008 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.26■□□□□ 0.19
USP9XQ93008 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.26■□□□□ 0.19
USP9XQ93008 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.26■□□□□ 0.19
USP9XQ93008 AC009533.2-201ENST00000543664 586 ntBASIC16.26■□□□□ 0.19
USP9XQ93008 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
USP9XQ93008 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.26■□□□□ 0.19
USP9XQ93008 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.26■□□□□ 0.19
USP9XQ93008 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
USP9XQ93008 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.26■□□□□ 0.19
USP9XQ93008 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.26■□□□□ 0.19
USP9XQ93008 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP9XQ93008 AC012645.4-201ENST00000610691 1061 ntBASIC16.26■□□□□ 0.19
USP9XQ93008 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.25■□□□□ 0.19
USP9XQ93008 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.25■□□□□ 0.19
USP9XQ93008 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.25■□□□□ 0.19
USP9XQ93008 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.25■□□□□ 0.19
USP9XQ93008 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 Z83851.2-201ENST00000609564 659 ntBASIC16.25■□□□□ 0.19
USP9XQ93008 AC008735.5-201ENST00000623544 497 ntBASIC16.25■□□□□ 0.19
USP9XQ93008 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.25■□□□□ 0.19
USP9XQ93008 KRT8P7-201ENST00000533003 1432 ntBASIC16.25■□□□□ 0.19
USP9XQ93008 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.25■□□□□ 0.19
USP9XQ93008 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.25■□□□□ 0.19
USP9XQ93008 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
USP9XQ93008 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
USP9XQ93008 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP9XQ93008 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.25■□□□□ 0.19
USP9XQ93008 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.25■□□□□ 0.19
USP9XQ93008 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
USP9XQ93008 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
USP9XQ93008 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.25■□□□□ 0.19
USP9XQ93008 MTDHP5-201ENST00000598980 586 ntBASIC16.25■□□□□ 0.19
USP9XQ93008 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.25■□□□□ 0.19
USP9XQ93008 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
USP9XQ93008 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
USP9XQ93008 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.24■□□□□ 0.19
USP9XQ93008 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.24■□□□□ 0.19
USP9XQ93008 RPS2P1-201ENST00000434010 821 ntBASIC16.24■□□□□ 0.19
USP9XQ93008 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.24■□□□□ 0.19
USP9XQ93008 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.24■□□□□ 0.19
USP9XQ93008 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms