Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.18■□□□□ 0.98
USP6NLQ92738 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.18■□□□□ 0.98
USP6NLQ92738 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6NLQ92738 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6NLQ92738 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6NLQ92738 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
USP6NLQ92738 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
USP6NLQ92738 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6NLQ92738 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6NLQ92738 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.17■□□□□ 0.98
USP6NLQ92738 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.17■□□□□ 0.98
USP6NLQ92738 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
USP6NLQ92738 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USP6NLQ92738 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.17■□□□□ 0.98
USP6NLQ92738 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.17■□□□□ 0.98
USP6NLQ92738 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.17■□□□□ 0.98
USP6NLQ92738 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.17■□□□□ 0.98
USP6NLQ92738 AP005901.3-202ENST00000581653 237 ntBASIC21.17■□□□□ 0.98
USP6NLQ92738 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.17■□□□□ 0.98
USP6NLQ92738 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.17■□□□□ 0.98
USP6NLQ92738 AL592071.1-201ENST00000611956 408 ntBASIC21.17■□□□□ 0.98
USP6NLQ92738 REXO1L6P-202ENST00000619970 1078 ntBASIC21.17■□□□□ 0.98
USP6NLQ92738 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.17■□□□□ 0.98
USP6NLQ92738 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.17■□□□□ 0.98
USP6NLQ92738 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
USP6NLQ92738 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP6NLQ92738 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
USP6NLQ92738 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6NLQ92738 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6NLQ92738 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6NLQ92738 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6NLQ92738 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
USP6NLQ92738 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.16■□□□□ 0.98
USP6NLQ92738 KRT8P32-201ENST00000512863 1461 ntBASIC21.16■□□□□ 0.98
USP6NLQ92738 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
USP6NLQ92738 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6NLQ92738 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.16■□□□□ 0.98
USP6NLQ92738 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
USP6NLQ92738 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
USP6NLQ92738 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.16■□□□□ 0.98
USP6NLQ92738 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
USP6NLQ92738 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP6NLQ92738 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.16■□□□□ 0.98
USP6NLQ92738 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.16■□□□□ 0.98
USP6NLQ92738 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6NLQ92738 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.16■□□□□ 0.98
USP6NLQ92738 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
USP6NLQ92738 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.15■□□□□ 0.98
USP6NLQ92738 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
USP6NLQ92738 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.15■□□□□ 0.98
USP6NLQ92738 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
USP6NLQ92738 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
USP6NLQ92738 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.15■□□□□ 0.98
USP6NLQ92738 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.15■□□□□ 0.98
USP6NLQ92738 AF238378.1-201ENST00000526806 358 ntBASIC21.15■□□□□ 0.98
USP6NLQ92738 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
USP6NLQ92738 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.15■□□□□ 0.98
USP6NLQ92738 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.15■□□□□ 0.98
USP6NLQ92738 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP6NLQ92738 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP6NLQ92738 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP6NLQ92738 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP6NLQ92738 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP6NLQ92738 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6NLQ92738 AP000593.1-201ENST00000393668 712 ntBASIC21.14■□□□□ 0.97
USP6NLQ92738 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.14■□□□□ 0.97
USP6NLQ92738 SAPCD2P3-201ENST00000455031 850 ntBASIC21.14■□□□□ 0.97
USP6NLQ92738 AC091607.1-201ENST00000490318 1060 ntBASIC21.14■□□□□ 0.97
USP6NLQ92738 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.14■□□□□ 0.97
USP6NLQ92738 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.14■□□□□ 0.97
USP6NLQ92738 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
USP6NLQ92738 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP6NLQ92738 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6NLQ92738 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
USP6NLQ92738 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
USP6NLQ92738 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6NLQ92738 NSUN5P1-202ENST00000421140 1535 ntBASIC21.14■□□□□ 0.97
USP6NLQ92738 NSUN5P2-203ENST00000457352 1529 ntBASIC21.14■□□□□ 0.97
USP6NLQ92738 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
USP6NLQ92738 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP6NLQ92738 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms