Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX1Q92499 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX1Q92499 AL023284.2-201ENST00000405850 579 ntBASIC19.94■□□□□ 0.78
DDX1Q92499 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX1Q92499 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 KRT18P57-201ENST00000443599 1254 ntBASIC19.94■□□□□ 0.78
DDX1Q92499 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.94■□□□□ 0.78
DDX1Q92499 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 AC073592.3-201ENST00000625118 1834 ntBASIC19.94■□□□□ 0.78
DDX1Q92499 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX1Q92499 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX1Q92499 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
DDX1Q92499 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DDX1Q92499 GPAT2P1-201ENST00000444924 1672 ntBASIC19.94■□□□□ 0.78
DDX1Q92499 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX1Q92499 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDX1Q92499 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDX1Q92499 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DDX1Q92499 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
DDX1Q92499 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX1Q92499 TERF1P1-201ENST00000311003 1181 ntBASIC19.93■□□□□ 0.78
DDX1Q92499 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX1Q92499 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX1Q92499 NAPSB-206ENST00000562112 1266 ntBASIC19.93■□□□□ 0.78
DDX1Q92499 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX1Q92499 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX1Q92499 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX1Q92499 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX1Q92499 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX1Q92499 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX1Q92499 AC120498.9-201ENST00000339021 3867 ntBASIC19.92■□□□□ 0.78
DDX1Q92499 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX1Q92499 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.92■□□□□ 0.78
DDX1Q92499 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.92■□□□□ 0.78
DDX1Q92499 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX1Q92499 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX1Q92499 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDX1Q92499 MIR4674-201ENST00000582457 87 ntBASIC19.92■□□□□ 0.78
DDX1Q92499 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
DDX1Q92499 AL023803.3-201ENST00000615559 522 ntBASIC19.92■□□□□ 0.78
DDX1Q92499 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
DDX1Q92499 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDX1Q92499 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.92■□□□□ 0.78
DDX1Q92499 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX1Q92499 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
DDX1Q92499 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX1Q92499 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX1Q92499 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX1Q92499 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX1Q92499 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DDX1Q92499 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX1Q92499 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX1Q92499 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX1Q92499 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.91■□□□□ 0.78
DDX1Q92499 AC091076.1-201ENST00000610741 619 ntBASIC19.91■□□□□ 0.78
DDX1Q92499 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX1Q92499 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
DDX1Q92499 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX1Q92499 KRT8P45-201ENST00000414328 1447 ntBASIC19.91■□□□□ 0.78
DDX1Q92499 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX1Q92499 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX1Q92499 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms