Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD6Q8TD26 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD6Q8TD26 AL596325.1-201ENST00000563991 1082 ntBASIC16.82■□□□□ 0.28
CHD6Q8TD26 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 HOXB1-202ENST00000577092 1414 ntBASIC16.81■□□□□ 0.28
CHD6Q8TD26 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 AC024563.2-201ENST00000603282 481 ntBASIC16.81■□□□□ 0.28
CHD6Q8TD26 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD6Q8TD26 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 LAGE3P1-201ENST00000425356 484 ntBASIC16.81■□□□□ 0.28
CHD6Q8TD26 DUX4L27-201ENST00000554796 1261 ntBASIC16.81■□□□□ 0.28
CHD6Q8TD26 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.81■□□□□ 0.28
CHD6Q8TD26 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 AC051619.7-201ENST00000568314 623 ntBASIC16.8■□□□□ 0.28
CHD6Q8TD26 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 AC097374.2-201ENST00000618617 1306 ntBASIC16.8■□□□□ 0.28
CHD6Q8TD26 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD6Q8TD26 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.8■□□□□ 0.28
CHD6Q8TD26 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 GPR89P-201ENST00000407924 1495 ntBASIC16.79■□□□□ 0.28
CHD6Q8TD26 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.79■□□□□ 0.28
CHD6Q8TD26 HCG4-201ENST00000418983 998 ntBASIC16.79■□□□□ 0.28
CHD6Q8TD26 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHD6Q8TD26 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.79■□□□□ 0.28
CHD6Q8TD26 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.79■□□□□ 0.28
CHD6Q8TD26 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.79■□□□□ 0.28
CHD6Q8TD26 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CHD6Q8TD26 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.79■□□□□ 0.28
CHD6Q8TD26 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHD6Q8TD26 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHD6Q8TD26 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHD6Q8TD26 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.78■□□□□ 0.28
CHD6Q8TD26 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 AC018845.2-201ENST00000568326 409 ntBASIC16.78■□□□□ 0.28
CHD6Q8TD26 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.78■□□□□ 0.28
CHD6Q8TD26 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD6Q8TD26 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms